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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815195.1_cds_XP_016498230.1_12281
CDS Infomation

[gene=LOC107816983] [db_xref=GeneID:107816983] [protein=tyrosine decarboxylase 1-like isoform X4] [protein_id=XP_016498230.1] [location=complement(join(94451..94573,94695..94832,102465..102588,103522..103586,104240..104296,104601..104765,105954..106013,106839..106979,107203..107366,107724..107988,108073..108145,108390..108466))] [gbkey=CDS]
Sequence

ATGGTCACAAAATGGTGGATTTCATTGCTGATTATTACAAGAATATCGAGAACTTTCCTG
TTCTCAGTCAAGTTCAGCCCGGTTATCTACGTAAGCTACTTCCTGAAACCGCACCTGCTC
ATTCTGAGACATTGCAAGACGTTCTTGAAGGCGTGTAATTTGGATCTCGTGCCATTTGAT
CCAGATATTCAGACAAAAATATTACCGGGGGTGACTCATTGGCAGAGCCCAGATTACTTT
GCATATTTTCCTTCTAATAGTAGTGTAGCTGGATTTTTGGGGGAGATGCTCAGTGCCGGG
ATTAACATGGTTGGTTTTAGTTGGATAACTTCCCCAGCAGCAACCGAGCTCGAAATGATC
GTTTTGGATTGGCTTGCTAAAGCACTTAAGTTGCCCGATGAATTCCTTTCAACAGGTCAA
GGAGGTGGAGTCATACAGGGCACAGCAAGTGAAGCTGTTCTAGTTGTGCTTTTAGCTGCC
CGGGACAAGGTTCTGAGAAGGGTCGGAAAAGATGCAATTGGAAAACTGGTGGTCTATTGT
TCTGATCAAACTCATTCTGCTTTACAGAAAGCTTGCCAGATAGGAGGAATTCATCCTGAG
AATTTTCGGATGCTGAAAGCAGTCTCATGCAGGGATTATGCTCTTTCTCCTGACGCACTT
TCAGAAGCTGTATCACATGACCTGGCCACTGGTTTAATACCCTTCTTCTTTTGTGCTACT
ATTGGTACAACATCTTCCACTGCTGTGGATCCTTTGCCTGCCCTGGGAAAGATTACCAAG
AGTAATAGCATGTGGTTTCATGTGGATGCTGCCTACGCTGGAAGTGCATGTATCTGTCCA
GAATTCCGGCACTATATTGATGGTGTAGAAGAAGCTGATTCTTTCAACATGAATGCACAT
AAGTGGTTCCTGACAAACTTTGACTGTTCAGCTCTCTGGGTCAAGGACCGGAGTGCACTT
ATCCAGTCACTGTCAACAAATCCTGAATTTCTCAAAAACAAAGCTTCTCAAGGAAACTTG
GTTGTGGATTACAAAGACTGGCAAATTCCTCTTGGGCGCAGGTTCAGATCATTGAAGCTG
TGGATGGTATTGAGACTCTATGGGCTGGAAAAGCTTCAAGCTTACGTAAGAAATCATATA
GAACTAGCAAGGCGTTTTGAGGAACACATTGCTCAAGACCAGAGGTTTGAGATTGTCACC
CCTCGGAAGTTCTCTTTGGTTTGCTTTCGCTTACGACCACCTCAGAGTAATGAAGATTAT
GCCAATAAACTGAACCATGACCTGCTAGATGCTGTTAACTCAACTGGGAAATTGTTTATT
TCTCACACGGTTCTTTCAAATAGATACATACTACGCCTTGCAGTAGGGGCCCCACTGACA
GAAGAGAGGCACATTCTTGCAGCTTGGAAAGTTTTTCAAGATGAGGCTGCTACATTGTTA
AGCAAATGTTAA

Peptide Sequence

PEP ID

XP_016498230.1
PEP Infomation

PREDICTED: tyrosine decarboxylase 1-like isoform X4 [Nicotiana tabacum]
Sequence

MVTKWWISLLIITRISRTFLFSVKFSPVIYVSYFLKPHLLILRHCKTFLKACNLDLVPFD
PDIQTKILPGVTHWQSPDYFAYFPSNSSVAGFLGEMLSAGINMVGFSWITSPAATELEMI
VLDWLAKALKLPDEFLSTGQGGGVIQGTASEAVLVVLLAARDKVLRRVGKDAIGKLVVYC
SDQTHSALQKACQIGGIHPENFRMLKAVSCRDYALSPDALSEAVSHDLATGLIPFFFCAT
IGTTSSTAVDPLPALGKITKSNSMWFHVDAAYAGSACICPEFRHYIDGVEEADSFNMNAH
KWFLTNFDCSALWVKDRSALIQSLSTNPEFLKNKASQGNLVVDYKDWQIPLGRRFRSLKL
WMVLRLYGLEKLQAYVRNHIELARRFEEHIAQDQRFEIVTPRKFSLVCFRLRPPQSNEDY
ANKLNHDLLDAVNSTGKLFISHTVLSNRYILRLAVGAPLTEERHILAAWKVFQDEAATLL
SKC

Transcript Sequence

Gene sequence data has not been registered.